Up in the air: Presence and collection of DNA from air and air conditioner units
Electrophoresis, 2024
Authors
Journal
Electrophoresis
Study Design
Addressed Question
Sampling methods of DNA from air and the persistance and circumstances taht have an influence on the DNA in air.
Activity Context
Category
Specifications
Variables of Interest
Stringency of Control
Number of Individuals
3
Replicates per Individual and Condition
61 samples in total, at least 4 replicates per condition
Nucleic Acid
Bodily Origin
Depositor & Contact
Depositor Characteristics
N/A
Criteria for Shedder Status
N/A
Previous Activities
N/A
Contact Scenario
N/A
Primary Substrate
Primary Substrate Type
N/A
Primary Substrate Material
Deposit
1 day, 1 week, 4 weeks
Delay
N/A
Secondary Substrate
Secondary Substrate Type
N/A
Secondary Substrate Material
N/A
Secondary Substrate Contact
N/A
Further Transfer
N/A
Sampling
Background DNA on Sampled Surface
Sampling Time
N/A
Persistence
1 day, 1 week, 4 weeks after cleaning
Sampling Method
double-swabbing (Sarstedt), direct sampling from air-filter
Sampling Area
swabbing of the whole filter, and direct sampling of 1/2, 1/4, 1/8 of an air-filter
Laboratory Analysis
Extraction
direct PCR (GlobalFiler), Swabs: DNA IQ System (Promega) 60 µl elution volume
DNA Quantification
Quantifler Trio DNA quantification kit (Thermo Fisher Scientific)
Input for Profiling
0.5 ng or 15 µL if the concentration was ≤0.0033 ng/µL
Profiling
PowerPlex21 kit (Promega; 30 cycles and 175 RFU detection threshold), direct PCR (GlobalFiler), typing: G3500xl Genetic Analyser (Thermo Fisher Scientific; 24 s, 1.2 kV) and Genemapper ID-X (v1.6) (Thermo Fisher Scientific)
Reference Samples
buccal swabs of participants
Profile Interpretation and Mixture Analysis
STRmix, NOC and identifiation
RNA Data Interpretation
N/A
Results
DNA Quantity
0 - 24.12 ng
Profile Quality
Mostly mixed (full and partial) profiles
Parameter Used for Comparison
DNA yield, NOC, filter size, sampling frame, number of alleles
Summary of Results
Human DNA can be recovered from air-filters, at least 2h of participating in a room was necessary for detection, detection and profile is depended to the filter type
Raised Questions
understanding the mechanisms that make DNA detectable in air condition filters
Cautionary Remarks
N/A