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Up in the air: Presence and collection of DNA from air and air conditioner units

Electrophoresis, 2024

Study Design

Addressed Question

Sampling methods of DNA from air and the persistance and circumstances taht have an influence on the DNA in air.

Activity Context

ProfessionalSocial ContactSpeaking

Category

Background DNAPersistenceRecovery

Specifications

BG in Professional EnvironmentDNA ProfilingIndividual CharacteristicsPersistence with TimePrevious ActivitiesSamplingTransfer SequenceTransfer via Vector

Variables of Interest

Sampling Methodsampling durationsample sizeNOCenvironmental setting

Stringency of Control

Reality

Number of Individuals

3

Replicates per Individual and Condition

61 samples in total, at least 4 replicates per condition

Nucleic Acid

DNA

Bodily Origin

aerosolscell-free DNAunknown

Depositor & Contact

Depositor Characteristics

N/A

Criteria for Shedder Status

N/A

Previous Activities

N/A

Contact Scenario

N/A

Primary Substrate

Primary Substrate Type

N/A

Primary Substrate Material

Air

Deposit

1 day, 1 week, 4 weeks

Delay

N/A

Secondary Substrate

Secondary Substrate Type

N/A

Secondary Substrate Material

N/A

Secondary Substrate Contact

N/A

Further Transfer

N/A

Sampling

Background DNA on Sampled Surface

Sampled

Sampling Time

N/A

Persistence

1 day, 1 week, 4 weeks after cleaning

Sampling Method

double-swabbing (Sarstedt), direct sampling from air-filter

Sampling Area

swabbing of the whole filter, and direct sampling of 1/2, 1/4, 1/8 of an air-filter

Laboratory Analysis

Extraction

direct PCR (GlobalFiler), Swabs: DNA IQ System (Promega) 60 µl elution volume

DNA Quantification

Quantifler Trio DNA quantification kit (Thermo Fisher Scientific)

Input for Profiling

0.5 ng or 15 µL if the concentration was ≤0.0033 ng/µL

Profiling

PowerPlex21 kit (Promega; 30 cycles and 175 RFU detection threshold), direct PCR (GlobalFiler), typing: G3500xl Genetic Analyser (Thermo Fisher Scientific; 24 s, 1.2 kV) and Genemapper ID-X (v1.6) (Thermo Fisher Scientific)

Reference Samples

buccal swabs of participants

Profile Interpretation and Mixture Analysis

STRmix, NOC and identifiation

RNA Data Interpretation

N/A

Results

DNA Quantity

0 - 24.12 ng

Profile Quality

Mostly mixed (full and partial) profiles

Parameter Used for Comparison

DNA yield, NOC, filter size, sampling frame, number of alleles

Summary of Results

Human DNA can be recovered from air-filters, at least 2h of participating in a room was necessary for detection, detection and profile is depended to the filter type

Raised Questions

understanding the mechanisms that make DNA detectable in air condition filters

Cautionary Remarks

N/A