The diversity of shedder tests and a novel factor that affects DNA transfer
Forensic science international. Genetics, 2021
Authors
Journal
Forensic science international. Genetics
Study Design
Addressed Question
investigating impact of moisturizer application on DNA transfer, shedder status
Activity Context
Category
Specifications
Variables of Interest
Stringency of Control
Number of Individuals
8
Replicates per Individual and Condition
3 for each time interval
Nucleic Acid
Bodily Origin
Depositor & Contact
Depositor Characteristics
N/A
Criteria for Shedder Status
As determined by Fonnelop et al. (2017): 15 participants (5 male, 10 female) performed the same test (uncontrolled handwashing conditions, firmly grabbing 15mL plastic tubes for 10s in the dominant hand) in triplicates (at least 6h inbetween samplings). Classification as good shedders (=2 or 3 out of 3 DNA quantities above group mean DNA yield and min. 12 complete loci out of 16 loci tested in min. 2 out of 3 profiles) or poor shedders (=more than 4 incomplete loci in min. 2 profiles or 2 or 3 below mean DNA yields)
Previous Activities
application of hand moisturizers: a: greasy and slowly absorbed; b: less greasy and faster absorbed either 1min, 10min, 30min or 60min before tube holding experiment. Activities inbetween were not limited or classified
Contact Scenario
tube holding experiment as described in Fonnelop et al. (2017): firmly grabbing 15mL plastic tubes for 10s in the dominant hand after application of moisturizer (time intervals 1min, 10min, 30min, 60min)
Primary Substrate
Primary Substrate Type
15mL plastic tubes
Primary Substrate Material
Deposit
holding tube for 10s
Delay
holding tube after 1min, 10min, 30min, 60min after application of moisturizer
Secondary Substrate
Secondary Substrate Type
N/A
Secondary Substrate Material
N/A
Secondary Substrate Contact
N/A
Further Transfer
N/A
Sampling
Background DNA on Sampled Surface
Sampling Time
direct
Persistence
N/A
Sampling Method
premoistened PurFlock Ultrafine Flexible Swab (Puritan)
Sampling Area
N/A
Laboratory Analysis
Extraction
Investigator GO! Kit (Qiagen)
DNA Quantification
QS5 Realtime PCR System (Thermo Fisher Sc.)
Input for Profiling
2 µl sample, total volume 11 µl
Profiling
PCR: Powerplex ESX17 (Promega) using half reaction batch, profiling on ABI3500 Genetic Analyzer, POP4, 36cm array (ThermoFisher), Data Interpretation: GeneMapper ID-X, analysis threshold 50RFU, Locus-specific stutter-filter
Reference Samples
N/A
Profile Interpretation and Mixture Analysis
DNA quantity and number of donor alleles as described by Fonnelop (2017)
RNA Data Interpretation
N/A
Results
DNA Quantity
180-6377 pg (supp. Material)
Profile Quality
strong variation (higher quality for moisturizer treatment even after 60min)
Parameter Used for Comparison
% of known individual's alleles detected, mixture proportion (calculated with EuroForMix)
Summary of Results
moisturizer has an impact on shedder status and corresponding DNA transfer. The effect depends on the type of moisturizer used
Raised Questions
N/A
Cautionary Remarks
N/A