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Shedder status-An analysis over time and assessment of various contributing factors

Journal of Forensic Sciences, 2023

Study Design

Addressed Question

Shedder status determination and its variation over time

Activity Context

None

Category

Primary Deposit

Specifications

ContactIndividual Characteristics

Variables of Interest

Shedder Status

Stringency of Control

Controlled

Number of Individuals

shedder status determination (1st part): 81; shedder status after 1 year: 38

Replicates per Individual and Condition

6

Nucleic Acid

DNA

Bodily Origin

skin (hands)

Depositor & Contact

Depositor Characteristics

first part (shedder status determination): 53 female, 28 male; shedder status after 1 year (2nd part): subset of first part: 28 female, 10 male

Criteria for Shedder Status

categorized as poor, intermediate, or good shedders based on the criteria defined in Tan et al. (2019)

Previous Activities

hands washed with soap and water, dried with clean paper towels, and then resumed normal activities for 15 minutes, avoiding food consumption, wearing gloves, or touching another person

Contact Scenario

gripping a sterile plastic tube in each hand for 10 seconds

Primary Substrate

Primary Substrate Type

sterile plastic tube

Primary Substrate Material

Plastic

Deposit

holding for 10 seconds

Delay

sampling within 2 hours after deposition and sampling after at least 6 hours after deposition

Secondary Substrate

Secondary Substrate Type

N/A

Secondary Substrate Material

N/A

Secondary Substrate Contact

N/A

Further Transfer

N/A

Sampling

Background DNA on Sampled Surface

Negative (Assumed)

Sampling Time

sampling within 2 hours after deposition and sampling after at least 6 hours after deposition

Persistence

storage at room temperature until sampling

Sampling Method

swabbing: wet and dry cotton swabs

Sampling Area

N/A

Laboratory Analysis

Extraction

DNA IQ™ Casework Extraction Kit for preprocessing and DNA IQ™ Casework Pro Kit for extraction on a Maxwell® FSC instrument (Promega)

DNA Quantification

Quantifiler® Duo DNA Quantification kit (Applied Biosystems) on the QuantStudio™ 7 Flex Real-Time PCR System (Applied Biosystems)

Input for Profiling

amplification: max. 1ng / 15 μl; CE: 3μl

Profiling

GlobalFiler™ PCR kit (Applied Biosystems) with maximum of 15 μL or 1 ng input DNA (29 cycles); Genetic Analyzer (Applied Biosystems) at 1.2 kV 24 s; GeneMapper® ID-X v1.2 software.

Reference Samples

available for all participants (and used for shedder status determination)

Profile Interpretation and Mixture Analysis

profile interpretation according to laboratory guidelines of analytical threshold 110 RFU and stochastic threshold 535 RFU

RNA Data Interpretation

N/A

Results

DNA Quantity

1.5% > 2ng with 12.68ng maximum; 4.0% at least 1ng; 68% no detectable DNA; 24% <0.5ng DNA

Profile Quality

27% below laboratorys reoporting criteria of 16 alleles; 61% reportable but not interpretable (mixtures >3 contributors); 13% interpretable profiles (95% of those matched person who held the tube); 33% full profiles, rest partial

Parameter Used for Comparison

% of individuals alleles detected

Summary of Results

slight variation of shedder status throughout the day (3 different time points) with constant proportion of poor shedders. The proportion of intermediate shedders was highest in phase 2 in the morning, while the proportion of good shedders was highest in phase 2 in the afternoon. After one year, shedder status of 50% of the volunteers stayed the same while the other 50% changed.

Raised Questions

N/A

Cautionary Remarks

method of shedder status determination is only reported in a FSI supplement series paper (10.1016/j.fsigss.2019.10.012) (not peer reviewed and therefore not presented here) and might not be well described / established