Shedder status-An analysis over time and assessment of various contributing factors
Journal of Forensic Sciences, 2023
Authors
Journal
Journal of Forensic Sciences
Study Design
Addressed Question
Shedder status determination and its variation over time
Activity Context
Category
Specifications
Variables of Interest
Stringency of Control
Number of Individuals
shedder status determination (1st part): 81; shedder status after 1 year: 38
Replicates per Individual and Condition
6
Nucleic Acid
Bodily Origin
Depositor & Contact
Depositor Characteristics
first part (shedder status determination): 53 female, 28 male; shedder status after 1 year (2nd part): subset of first part: 28 female, 10 male
Criteria for Shedder Status
categorized as poor, intermediate, or good shedders based on the criteria defined in Tan et al. (2019)
Previous Activities
hands washed with soap and water, dried with clean paper towels, and then resumed normal activities for 15 minutes, avoiding food consumption, wearing gloves, or touching another person
Contact Scenario
gripping a sterile plastic tube in each hand for 10 seconds
Primary Substrate
Primary Substrate Type
sterile plastic tube
Primary Substrate Material
Deposit
holding for 10 seconds
Delay
sampling within 2 hours after deposition and sampling after at least 6 hours after deposition
Secondary Substrate
Secondary Substrate Type
N/A
Secondary Substrate Material
N/A
Secondary Substrate Contact
N/A
Further Transfer
N/A
Sampling
Background DNA on Sampled Surface
Sampling Time
sampling within 2 hours after deposition and sampling after at least 6 hours after deposition
Persistence
storage at room temperature until sampling
Sampling Method
swabbing: wet and dry cotton swabs
Sampling Area
N/A
Laboratory Analysis
Extraction
DNA IQ™ Casework Extraction Kit for preprocessing and DNA IQ™ Casework Pro Kit for extraction on a Maxwell® FSC instrument (Promega)
DNA Quantification
Quantifiler® Duo DNA Quantification kit (Applied Biosystems) on the QuantStudio™ 7 Flex Real-Time PCR System (Applied Biosystems)
Input for Profiling
amplification: max. 1ng / 15 μl; CE: 3μl
Profiling
GlobalFiler™ PCR kit (Applied Biosystems) with maximum of 15 μL or 1 ng input DNA (29 cycles); Genetic Analyzer (Applied Biosystems) at 1.2 kV 24 s; GeneMapper® ID-X v1.2 software.
Reference Samples
available for all participants (and used for shedder status determination)
Profile Interpretation and Mixture Analysis
profile interpretation according to laboratory guidelines of analytical threshold 110 RFU and stochastic threshold 535 RFU
RNA Data Interpretation
N/A
Results
DNA Quantity
1.5% > 2ng with 12.68ng maximum; 4.0% at least 1ng; 68% no detectable DNA; 24% <0.5ng DNA
Profile Quality
27% below laboratorys reoporting criteria of 16 alleles; 61% reportable but not interpretable (mixtures >3 contributors); 13% interpretable profiles (95% of those matched person who held the tube); 33% full profiles, rest partial
Parameter Used for Comparison
% of individuals alleles detected
Summary of Results
slight variation of shedder status throughout the day (3 different time points) with constant proportion of poor shedders. The proportion of intermediate shedders was highest in phase 2 in the morning, while the proportion of good shedders was highest in phase 2 in the afternoon. After one year, shedder status of 50% of the volunteers stayed the same while the other 50% changed.
Raised Questions
N/A
Cautionary Remarks
method of shedder status determination is only reported in a FSI supplement series paper (10.1016/j.fsigss.2019.10.012) (not peer reviewed and therefore not presented here) and might not be well described / established