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Self‑ and non‑self‑DNA on hands and sleeve cufs

International Journal of Legal Medicine, 2024

Authors

Journal

International Journal of Legal Medicine


Study Design

Addressed Question

Transfer of background DNA on different day times. Transfer of background DNA via sleeve cuffs.

Activity Context

Social Contact

Category

Background DNAPersistence

Specifications

BG on ClothingBG on Skin / Other Body LocationsContactIndividual CharacteristicsPersistence with DecontaminationPersistence with Further ContactPersistence with Regular ActivitiesPersistence with TimePrevious ActivitiesSurfaceTransfer via HandshakeTransfer via Vector

Variables of Interest

daytimeshedder propensityfabric materialprior activity

Stringency of Control

Reality

Number of Individuals

4

Replicates per Individual and Condition

25

Nucleic Acid

DNA

Bodily Origin

touch DNAskin cells

Depositor & Contact

Depositor Characteristics

N/A

Criteria for Shedder Status

N/A

Previous Activities

morning probes: transport to workplace, record of last handwashing. Afternoon probes: record of last handwashing, record of wearing gloves during lab work.

Contact Scenario

accumulation of background DNA, n.s.

Primary Substrate

Primary Substrate Type

sleeve cufs

Primary Substrate Material

CottonFabricSkin

Deposit

N/A

Delay

N/A

Secondary Substrate

Secondary Substrate Type

fabric

Secondary Substrate Material

CottonFabric

Secondary Substrate Contact

N/A

Further Transfer

N/A

Sampling

Background DNA on Sampled Surface

Sampled

Sampling Time

in the morning on arrival and in the afternoon (2h after lunch)

Persistence

5-7 h interval between morning and afternoon sampling

Sampling Method

sleeve cuffs: SceneSafe fast minitape Hands: sterile viscose forensic swabs

Sampling Area

13.3 cm × 6.6 cm on the back of the cuff, hand n.s.

Laboratory Analysis

Extraction

minitapes: enzymatic digestion then phenol–chloroform extraction. Elution volume n.s. Swabs: PrepFiler Express™ Kit (ThermoFisher). Elution volume 50 µl

DNA Quantification

Quantifiler™ HP Kit on a 7500 Real-Time PCR System (Thermo Fisher, Waltham, MA, USA)

Input for Profiling

0.5 ng DNA for multiplex PCR; for low-concentration samples 10 µL of extract when concentration < 0.05 ng/µL

Profiling

AmpFLSTR™ NGM Select™ PCR Amplification Kit (ThermoFisher, Waltham, MA, USA) on a T3000 Biometra Thermocycler (Analytik Jena, Germany)

Reference Samples

buccal swabs from participants, co-residents and co-workers database

Profile Interpretation and Mixture Analysis

NOC: Counting of Contributors (allele counting) and STRmix

RNA Data Interpretation

N/A

Results

DNA Quantity

0 - 1 log10(ng)

Profile Quality

Mostly mixed (full and partial) profiles

Parameter Used for Comparison

DNA yield, NOC

Summary of Results

sleeve cuffs carryied more DNA than hands, synthetic fabric carryied more DNA than natural fibres, using public transport increased DNA on hands

Raised Questions

investigation on acticities that increase DNA yield on hands

Cautionary Remarks

DNA Quantity just logharithmical, time since clothing washing undetermined