Influence of an individual's age on the amount and interpretability of DNA left on touched items
International Journal of Legal Medicine, 2013
Authors
Journal
International Journal of Legal Medicine
Study Design
Addressed Question
amount of an individual's age on the quality and quantity of shed DNA
Activity Context
Category
Specifications
Variables of Interest
Stringency of Control
Number of Individuals
213
Replicates per Individual and Condition
1, 2 (20%)
Nucleic Acid
Bodily Origin
Depositor & Contact
Depositor Characteristics
individuals from 1-89, more or less equally distributed over all age groups and both sexes
Criteria for Shedder Status
depositing a full (good shedder) or partial (poor shedders) DNA profile on plastic tube (10 s grip) 15 min after handwashing (s. Lowe et. al (2002))
Previous Activities
regular handwashing/ handwashing 15 min prior to experiment for kids
Contact Scenario
handwashing - delay - grip experiment
Primary Substrate
Primary Substrate Type
sterile plastic syringe
Primary Substrate Material
Deposit
grip 10s
Delay
N/A
Secondary Substrate
Secondary Substrate Type
N/A
Secondary Substrate Material
N/A
Secondary Substrate Contact
N/A
Further Transfer
N/A
Sampling
Background DNA on Sampled Surface
Sampling Time
direct
Persistence
N/A
Sampling Method
N/A
Sampling Area
20ml plastic syringe surface
Laboratory Analysis
Extraction
modified phenol/chloroform method, final volume: 40 µl
DNA Quantification
Quantifiler Human DNA Quantification kit (Applied biosystems)
Input for Profiling
0.5 ng in 12.5 µl for all samples
Profiling
PowerPlex ESX (Promega), PowerPlex ESI 17 or PowerPlex 21 in case of complete dropouts, ABI3130 Genetic Analyzer (Applied Biosystems), GeneMapper ID software v3.2, threshold: 50rfu
Reference Samples
buccal swabbings from all individuals
Profile Interpretation and Mixture Analysis
interpretability according to three categories: complete (every allele of person in question detected), partial profile (every allele in ten or more STR loci detected), no profile (alleles in less than ten STR loci), regardless of any other alleles
RNA Data Interpretation
N/A
Results
DNA Quantity
0-80 ng; Fig. S2: up to 5ng
Profile Quality
complete profile (every allele in every STR): 0-80 %, partial profile (every allele in 10 or more STRs): 15-50%, no profile (alleles in less than 10 STRs): 0-40 %; drop-in and drop-out artefacts often observed
Parameter Used for Comparison
profile completeness in categories based on number of alleles from contributor
Summary of Results
children deposit higher amounts and more interpretable profiles (hypothesis: due to higher cell proliferation rate, more cells due to childish behavior); fewer amounts and partial or no profiles from elderly >70 yrs.; adults mostly bad shedders (according to Lowe et al., 2002); high consistency of results in repeated experiments
Raised Questions
N/A
Cautionary Remarks
text and Fig. S2 show differences in amount of DNA retrieved; gender assessed but influence not evaluated; previous activates n.a.