Fingerprints as evidence for a genetic profile: morphological study on fingerprints and analysis of exogenous and individual factors affecting DNA typing.
Journal of forensic sciences, 2003
Authors
Journal
Journal of forensic sciences
Study Design
Addressed Question
Analysis of factors affecting quantity and quality of DNA in a fingerprint
Activity Context
Category
Specifications
Variables of Interest
Stringency of Control
Number of Individuals
11
Replicates per Individual and Condition
1-4
Nucleic Acid
Bodily Origin
Depositor & Contact
Depositor Characteristics
3 participants classified as good shedders
Criteria for Shedder Status
higher average DNA deposit and positive typing results in all experiments with unwashed hands
Previous Activities
no handwashing or vigorous handwashing with antiseptic soap
Contact Scenario
(handwashing) - fingerprint deposition - sampling
Primary Substrate
Primary Substrate Type
N/A
Primary Substrate Material
Deposit
pressure 30s
Delay
N/A
Secondary Substrate
Secondary Substrate Type
N/A
Secondary Substrate Material
N/A
Secondary Substrate Contact
N/A
Further Transfer
N/A
Sampling
Background DNA on Sampled Surface
Sampling Time
direct
Persistence
N/A
Sampling Method
double swabbing (moistening agent: digestion buffer)
Sampling Area
fingerprint deposits
Laboratory Analysis
Extraction
proteolytic digestion, phenol-chloroform, Microcon-30 concentration to 20 µl
DNA Quantification
dot blot procedure
Input for Profiling
set volume: whole concentrated sample (20 µl)
Profiling
AmpFlSTR Profiler Plus kit increasing cycle number from 28 to 34 cycles (LCN), ABI prism 310 Genetic Analyzer, Genotyper 2.5 software, threshold: 100 rfu
Reference Samples
taken from depositors
Profile Interpretation and Mixture Analysis
comparison to reference profiles and identification of spurious alleles
RNA Data Interpretation
N/A
Results
DNA Quantity
0-3 ng (avg. Around 100 pg)
Profile Quality
mostly partial profiles (54.5%), followed by complete profiles (31.8%) and no results (13.6%); High MW-loci dropout, allele drop-out evenly spread, presence of stutter peaks, generally low peak height
Parameter Used for Comparison
max. DNA yield (ng), completeness donor profile, percentage accessory alleles
Summary of Results
no statistically significant differences between the three substrates for DNA yield or profiling success; high inter-individual differences: 3/11 individuals classified as good shedders; handwashing reduced DNA yield and profiling success; Profile observations: High MW-loci dropout, allele drop-out evenly spread, presence of stutter peaks, generally low peak height, presence of spurious alleles not attributable to donor mainly in unwashed hands samples and low MW-loci; increase to 34 cycles significantly increased artefacts up to uninterpretable profiles; number of spurious alleles inversely proportional to size of considered locus; Morphological analysis: detection of nucleated cells as well as stripped nuclei and tingible bodies in thumb print; number limited to few units (0-14), and significantly higher for some individuals; quantification results lower than expected from number of cells detected on morphological study slide -> significant DNA loss during extraction/sampling; indication of apoptosis: morphological finding of stripped nuclei and tingible bodies, gel electrophoresis; DNA yield significantly correlated with number of stripped nuclei but not number of nucleated cells (possible reason: different extraction efficiency?)
Raised Questions
N/A
Cautionary Remarks
comparison between DNA yield and morphological studies: DNA yield not obtained from thumb print but fingerprints (not the same deposition); usefulness of partial profiles n.s.; quantification and relative contribution of spurious alleles (secondary transfer) n.a.; how were cells and stripped nuclei differentiated? (possibility of artefacts?)