Evaluation of multiple transfer of DNA using mock case scenarios.
Legal Medicine, 2012
Authors
Journal
Legal Medicine
Study Design
Addressed Question
Can DNA transfer in mock case scenarios be predicted by DNA transfer rates estimated in Goray et al. (2010, x2)?
Activity Context
Category
Specifications
Variables of Interest
Stringency of Control
Number of Individuals
6
Replicates per Individual and Condition
5
Nucleic Acid
Bodily Origin
Depositor & Contact
Depositor Characteristics
N/A
Criteria for Shedder Status
N/A
Previous Activities
N/A
Contact Scenario
primary deposit of DNA by one individual - (delay) - secondary deposit to second person's lab coat - sampling
Primary Substrate
Primary Substrate Type
fabric: infant singlets, plastic toy blocks
Primary Substrate Material
Deposit
friction handling 1min
Delay
0, 24 h under closed hood
Secondary Substrate
Secondary Substrate Type
cotton fabric lab coat, previously worn for min. 2 days
Secondary Substrate Material
Secondary Substrate Contact
rubbing 1min
Further Transfer
N/A
Sampling
Background DNA on Sampled Surface
Sampling Time
direct
Persistence
N/A
Sampling Method
coats and infant singlets: tapelifting, toys: double swabbing
Sampling Area
designated contact areas from coats and outside front and back from infant singlets
Laboratory Analysis
Extraction
5% Chelex, Amicon Ultra Ym-30 concentration
DNA Quantification
Quantifiler Human DNA Quantification kit, ABI PRISM 7500 SDS Instrument
Input for Profiling
a.p.m.i.: 1 ng or 10 µl DNA template
Profiling
AmpFlSTR Profiler Plus, ABI Prism 3100 Genetic Analyzer, GeneMapper ID software, Threshold: 50 rfu
Reference Samples
taken from all participants
Profile Interpretation and Mixture Analysis
comparison to reference profile, common alleles counted towards both donors, when peak heights of the shared allele at least 1.5x higher than unique alleles at the same locus, profile contribution: % unique allelic peak height
RNA Data Interpretation
N/A
Results
DNA Quantity
0.009-9.2 ng
Profile Quality
mostly complete after primary transfer, partial to complete after secondary transfer
Parameter Used for Comparison
DNA yield, number of alleles from donor, recipient and unknown source, transfer % (=DNA from particular surface/sum of DNA on all surfaces)
Summary of Results
DNA from depositor observed on almost all lab coats with a higher contribution in comparison to recipient and unknown; unknown contribution in about half of samples, contribution generally low; transfer % from singlets (cotton to cotton) about as high as expected (34 and 20%), whereas transfer % from toys (plastic to cotton) higher than expected (73 and 74%>>14 and 49%); higher total deposition on singlet than on toys; Conclusion: It is likely that a number of variables affecting transfer rates in the re-enactment scenarios are greater than the number taken into an account when calculating the expected transfer rates under strictly controlled conditions
Raised Questions
effect of surface material, size and recovery method?; effect of background DNA -> more complicated interpretation?; additional transfer parameters need to be identified and investigated in order to build a model that can be used by scientists for estimation purposes
Cautionary Remarks
higher transfer % expected after 24 h delay seems counterintuitive; no consideration of background DNA on vectors; applied profile interpretation approach not applicable to casework samples; large deviations between replicates