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DNA fingerprinting secondary transfer from different skin areas: Morphological and genetic studies.

FSI Genetics, 2014

Study Design

Addressed Question

primary DNA transfer under different handwashing conditions

Activity Context

None

Category

PersistencePrimary Deposit

Specifications

Bodily OriginPersistence with Water ImmersionPrevious Activities

Variables of Interest

scenario before deposition (hand washing scenario)

Stringency of Control

Controlled

Number of Individuals

8

Replicates per Individual and Condition

1

Nucleic Acid

DNA

Bodily Origin

skin (fingertips)

Depositor & Contact

Depositor Characteristics

5 females and 3 males aged between 30 and 60

Criteria for Shedder Status

N/A

Previous Activities

handwashing scenario (no handwashing, conventional handwashing with regular soap, deep handwashing with antiseptic soap)

Contact Scenario

handwashing scenario - DNA deposit - sampling

Primary Substrate

Primary Substrate Type

body part: fingertips

Primary Substrate Material

Glass

Deposit

pressure 20s

Delay

N/A

Secondary Substrate

Secondary Substrate Type

N/A

Secondary Substrate Material

N/A

Secondary Substrate Contact

N/A

Further Transfer

N/A

Sampling

Background DNA on Sampled Surface

Negative (Confirmed)

Sampling Time

direct

Persistence

water immersion: handwashing: conventional or with antiseptic soap

Sampling Method

swabbing (wet: distilled water)

Sampling Area

glass slides

Laboratory Analysis

Extraction

DNA IQ system (Promega)

DNA Quantification

Quantifiler Duo DNA Quantification kit (AB), Applied Biosystems 7500 real time PCR instrument

Input for Profiling

a.p.m.i.: 1 ng

Profiling

AmpFlSTR NGM Select PCR amplification kit, ABI PRISM 310 Genetic Analyzer, GeneMapper ID v3.2.1

Reference Samples

taken from all participants

Profile Interpretation and Mixture Analysis

building consensus profiles from triplicate amplification for samples >200 pg: "not interpretable" when no consensus profile obtainable, "contaminated" when more than 2 peaks/locus, "undetectable" when no peaks above 50 rfu

RNA Data Interpretation

N/A

Results

DNA Quantity

0-0.018 ng/µl (elution volume n.s.)

Profile Quality

no results after handwashing, mixtures before handwashing

Parameter Used for Comparison

origin of alleles detected

Summary of Results

before handwashing, mixtures showing contamination (secondary transfer) events can be observed; directly after handwashing, no useful results obtained -> thus, sloughed keratinocytes cannot be the main source of touch DNA

Raised Questions

N/A

Cautionary Remarks

not defined whether "useful" result means undetectable or not interpretable